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Abstract Introduction Statistical data reveal that approximately 140 million radiological exams are performed annually in Brazil. These exams are designed to detect and to analyze fractures, caused by different types of trauma; as well as, to diagnose pathologies such as pulmonary diseases. For better visualization of those lesions or abnormalities, methods of image segmentation can be implemented. Such methods lead to the separation of the region of interest, which allows extracting the characteristics and anomalies of the desired tissue. However, the methods developed by researchers in this area still have restrictions. Consequently, we present an automatic pulmonary segmentation approach that overcomes these constraints. Methods This method is composed of a combination of Discrete Wavelet Packet Frame (DWPF), morphological operations and Gradient Vector Flow (GVF). The methodology is divided into four steps: Pre-processing - the original image is enhanced by discrete wavelet; Processing - where occurs a combination of the Otsu threshold with a series of morphological operations in order to identify the pulmonary object; Post-processing - an innovative form of using GVF improves the binary information of pulmonary tissue, and; Evaluation - the segmented images were evaluated for accuracy of detection the pulmonary region and border. Results The evaluation was carried out by segmenting 247 digital X-ray challenging images of the thorax human. The results show high for values of Overlap (97,63% ± 3.34%), and Average Contour Distance (0.69mm ± 0.95mm). Conclusion The results allow verifying that the proposed technique is robust and more accurate than other methods of lung segmentation, besides being a fully automatic method of lung segmentation.
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Abstract Introduction Numerical phantoms are important tools to design, calibrate and evaluate several methods in various image-processing applications, such as echocardiography and mammography. We present a framework for creating ultrasound numerical deformable phantoms based on Finite Element Method (FEM), Linear Isomorphism and Field II. The proposed method considers that the scatterers map is a property of the tissue; therefore, the scatterers should move according to the tissue strain. Methods First, a volume representing the target tissue is loaded. Second, parameter values, such as Young’s Modulus, scatterers density, attenuation and scattering amplitudes are inserted for each different regions of the phantom. Then, other parameters related to the ultrasound equipment, such as ultrasound frequency and number of transducer elements, are also defined in order to perform the ultrasound acquisition using Field II. Third, the size and position of the transducer and the pressures that are applied against the tissue are defined. Subsequently, FEM is executed and deformation is computed. Next, 3D linear isomorphism is performed to displace the scatterers according to the deformation. Finally, Field II is carried out to generate the non-deformed and deformed ultrasound data. Results The framework is evaluated by comparing strain values obtained the numerical simulation and from the physical phantom from CIRS. The mean difference between both phantoms is lesser than 10%. Conclusion The acoustic and deformation outcomes are similar to those obtained using a physical phantom. This framework led to a tool, which is available online and free of charges for educational and research purposes.
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INTRODUCTION: The rupture of atherosclerotic plaques causes millions of death yearly. It is known that the kind of predominant tissue is associated with its dangerousness. In addition, the mechanical properties of plaques have been proved to be a good parameter to characterize the type of tissue, important information for therapeutic decisions. METHODS: Therefore, we present an alternative and simple way to discriminate tissues. The procedure relies on computing an index, the ratio of the plaque area variation of a suspecting plaque, using images acquired with vessel and plaques, pre and post-deformation, under different intraluminal pressure. Numerical phantoms of coronary cross-sections with different morphological aspects, and simulated with a range of properties, were used for evaluation. RESULTS: The outcomes provided by this index and a widely used one were compared, so as to measure their correspondence. As a result, correlations up to 99%, a strong agreement with Bland-Altman and very similar histograms between the two indices, have shown a good level of equivalence between the methods. CONCLUSION: The results demonstrated that the proposed index discriminates highly lipidic from fibro-lipidic and calcified tissues in many situations, as good as the widely used index, yet the proposed method is much simpler to be computed.
ABSTRACT
No ano 2010, doenças cardiovasculares (CVD) causaram 33% do total das mortes no Brasil. Tomografia Ótica Coerente Intravascular (IOCT) é uma tecnologia que oferece imagens in vivo para detecção e monitoramento da progressão de CVD. O exame de IOCT permite mais precisão no diagnóstico; contudo, ainda é pequena a variedade de métodos quantitativos aplicados a IOCT na literatura, em comparação à outras modalidades relacionadas. Portanto neste trabalho é proposto um método de segmentação do lúmen, baseado em uma combinação de Fuzzy Connectedness, com múltiplas funções de afinidade, e Operações Morfológicas. As funções de afinidade usadas neste trabalho são: (I) Clássica, (II) Pesos Dinâmicos e (III) Bhattacharyya. Esta última é baseada no coeficiente de Bhattacharyya, utilizado habitualmente para speckle tracking. Primeiro, características não desejadas da imagem são atenuadas. Depois, informações da parede do vaso são obtidas utilizando Fuzzy Connectedness e um processo de binarização dinâmico. Finalmente, operações morfológicas são realizadas para melhorar o lúmen segmentado. Para avaliar o método proposto, um conjunto de 130 imagens advindas de humanos, porcos, e coelhos foram segmentadas e comparadas com seus respectivos "Gold Standards" feitos por especialistas. Uma média de verdadeiros positivos (TP%) = 98,08 e de falsos positivos (FP%) = 2,34 foram obtidas. Com isso, o método proposto resultou em uma maior eficácia do que os estudos publicados anteriormente, encorajando seu uso.
In 2010 cardiovascular disease (CVD) caused 33% of the total deaths in Brazil. Intravascular Optical Coherent Tomography (IOCT) is an imaging technology that provides in vivo detection and monitoring of the progression of coronary heart disease. IOCT exam allows more accurate diagnoses; nonetheless, the set of quantitative methods applied to IOCT in the literature is small compared to other related modalities. Therefore, the proposed approach presents a lumen segmentation method, based on a combination of Fuzzy Connectedness, with multiple affinity functions, and Morphological Operations. The affinity functions used in this work are: (I) classical, (II) Dynamic weights (III) Bhattacharyya. The latter is based on the Bhattacharyya coefficient, commonly used for speckle tracking. Firstly, unwanted features of the image are attenuated. Then, vessel-wall information is obtained using Fuzzy Connectedness and dynamic binarization process. Finally, morphological operations are performed to improve the segmented lumen. To evaluate the proposed method, a set of 130 images from humans, pigs and rabbits were segmented and compared to their corresponding gold standard made by experts. An average of true positive (TP%) = 98.08, and false positive (FP%) = 2.34 were obtained. Hence, the use of the proposed method is suggested since it has yielded higher efficiency than previously published studies.
ABSTRACT
Por ser capaz de mostrar aspectos morfológicos e patológicos de ateroscleroses, o Ultrassom Intravascular (IVUS) se tornou uma das modalidades de imagens médicas mais confiáveis e empregadas em intervenções cardíacas. As características de sua imagem aumentam as chances de um bom diagnóstico, resultando em terapias mais precisas. O estudo de segmentação da fronteira média-adventícia, dentre muitas aplicações, é importante para o aprendizado das propriedades mecânicas e determinação de algumas medidas específicas (raio, diâmetro, etc.) em vasos e placas. Neste trabalho, uma associação de técnicas de processamento de imagens está sendo proposta para atingir alta acurácia na segmentação da borda média-adventícia. Para tanto, foi feita uma combinação das seguintes técnicas: Redução do Speckle por Difusão Anisotrópica (SRAD), Wavelet, Otsu e Morfologia Matemática. Primeiramente, é usado SRAD para atenuar os ruídos speckle. Posteriormente, é executada Transformada Wavelet para extração das características dos vasos e placas. Uma versão binarizada dessas características é criada na qual o limiar ótimo é definido por Otsu. Finalmente, é usada Morfologia Matemática para obtenção do formato da adventícia. O método proposto é avaliado ao segmentar 100 imagens de alta complexidade, obtendo uma média de Verdadeiro Positivo (TP(%)) = 92,83 ± 4,91, Falso Positivo (FP(%)) = 3,43 ± 3,47, Falso Negativo (FN(%)) = 7,17 ± 4,91, Máximo Falso Positivo (MaxFP(mm)) = 0,27 ± 0,22, Máximo Falso Negativo (MaxFN(mm)) = 0,31 ± 0,2. A eficácia do nosso método é demonstrada, comparando este resultado com outro trabalho recente na literatura.
By being able to show morphological and pathological aspects of atherosclerosis, the Intravascular Ultrasound (IVUS) be¬came one of the most reliable and employed medical imaging modality in cardiac interventions. Its image characteristics in¬crease the chances of a good diagnostic, resulting in a precise therapy. The study of media-adventitia borders segmentation in IVUS, among many applications, is important for learning about the mechanical properties and determining some specific measurements (radius, diameter, etc.) in vases and plaques. An approach is proposed to achieve high accuracy in media-adventitia borders segmentation, by making a combination of different image processing operations: Speckle Reducing Anisotropic Diffusion (SRAD), Wavelet, Otsu and Mathematical Morphology. Firstly, SRAD is applied to attenuate the speckle noise. Next, the vessel and plaque features are extracted by performing Wavelet Transform. Optimal thresholding is car¬ried out by Otsu method to create a binarized version of these features. Then, Mathematical Morphology operations are used to obtain an adventitia shape. The proposed approach is evaluated by segmenting 100 challenging images, obtaining an average of True Positive (TP(%)) = 92.83 ± 4.91, False Positive (FP(%)) = 3.43 ± 3.47, False Negative (FN(%)) = 7.17 ± 4.91, Max False Positive (MaxFP(mm)) = 0.27 ± 0.22, Max False Negative (MaxFN(mm)) = 0.31 ± 0.2. The effectiveness of our approach is demonstrated by comparing this result with another recent work in the literature.